HCSGD entry for TTC8

1. General information

Official gene symbolTTC8
Entrez ID123016
Gene full nametetratricopeptide repeat domain 8
Other gene symbolsBBS8 RP51
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001103RNA polymerase II repressing transcription factor bindingIPImolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005737CytoplasmIEAcellular_component
GO:0005813CentrosomeIDAcellular_component
GO:0005929CiliumIDAcellular_component
GO:0007411Axon guidanceIEAbiological_process
GO:0007608Sensory perception of smellIEAbiological_process
GO:0015031Protein transportIEAbiological_process
GO:0021772Olfactory bulb developmentIEAbiological_process
GO:0032391Photoreceptor connecting ciliumIEAcellular_component
GO:0032880Regulation of protein localizationIEAbiological_process
GO:0034464BBSomeIDA IEAcellular_component
GO:0035264Multicellular organism growthIEAbiological_process
GO:0036064Ciliary basal bodyIDAcellular_component
GO:0042384Cilium assemblyIEA TASbiological_process
GO:0045444Fat cell differentiationIEAbiological_process
GO:0048560Establishment of anatomical structure orientationIMPbiological_process
GO:0050893Sensory processingTASbiological_process
GO:0060170Ciliary membraneIEAcellular_component
GO:0060219Camera-type eye photoreceptor cell differentiationIEAbiological_process
GO:0061326Renal tubule developmentIEAbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.62463645000.19827802140.99999024730.8610585382

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0943550551
GSE13712_SHEARDown-0.1213683330
GSE13712_STATICDown-0.1127574038
GSE19018Up0.3782656572
GSE19899_A1Down-0.3334117171
GSE19899_A2Up0.0171970571
PubMed_21979375_A1Down-1.4692641844
PubMed_21979375_A2Down-0.3732453274
GSE35957Up0.2310325918
GSE36640Down-0.1867008504
GSE54402Up0.0447939787
GSE9593Up0.3600444247
GSE43922Down-0.4526646572
GSE24585Up0.1157221435
GSE37065Up0.2084019552
GSE28863_A1Up0.0239634161
GSE28863_A2Down-0.0320739056
GSE28863_A3Down-0.0891333306
GSE28863_A4Up0.0594609013
GSE48662Down-0.3115037317

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-373-3pMIMAT0000726MIRT002556Microarray//Microarray;OtherFunctional MTI (Weak)15685193
hsa-miR-124-3pMIMAT0000422MIRT022749MicroarrayFunctional MTI (Weak)18668037
hsa-miR-125a-3pMIMAT0004602MIRT038637CLASHFunctional MTI (Weak)23622248
hsa-miR-197-3pMIMAT0000227MIRT048124CLASHFunctional MTI (Weak)23622248
Entries Per Page
Displaying Page of
    • mirRecord

MicroRNA name

mirBase ID

Target site number

MiRNA mature ID

Test method inter

MiRNA regulation site

Reporter target site

Pubmed ID

hsa-miR-373-3pMIMAT0000726NAhsa-miR-37315685193
Entries Per Page
Displaying Page of

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.