HCSGD entry for TMC2

1. General information

Official gene symbolTMC2
Entrez ID117532
Gene full nametransmembrane channel-like 2
Other gene symbolsC20orf145 dJ686C3.3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0006811Ion transportIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
GO:0032426Stereocilium bundle tipIEAcellular_component
GO:0050910Detection of mechanical stimulus involved in sensory perception of soundIEAbiological_process
GO:0060005Vestibular reflexIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.85463553820.78668451050.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0595873433
GSE13712_SHEARDown-0.0725157400
GSE13712_STATICUp0.1188653054
GSE19018Up0.1326364258
GSE19899_A1Down-0.1578576793
GSE19899_A2Up0.0729239594
PubMed_21979375_A1Down-0.0139085742
PubMed_21979375_A2Up0.1247609936
GSE35957Up0.0792278905
GSE36640Up0.0402485637
GSE54402Down-0.0412934848
GSE9593Down-0.0848181386
GSE43922Up0.0312351801
GSE24585Down-0.0062736923
GSE37065Down-0.0343371700
GSE28863_A1Down-0.0536314939
GSE28863_A2Up0.0593137391
GSE28863_A3Up0.1151143336
GSE28863_A4Up0.0497993532
GSE48662Down-0.0193371195

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.