HCSGD entry for TMC2

1. General information

Official gene symbolTMC2
Entrez ID117532
Gene full nametransmembrane channel-like 2
Other gene symbolsC20orf145 dJ686C3.3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0006811Ion transportIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
GO:0032426Stereocilium bundle tipIEAcellular_component
GO:0050910Detection of mechanical stimulus involved in sensory perception of soundIEAbiological_process
GO:0060005Vestibular reflexIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.85463553820.78668451050.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0595873433
GSE13712_SHEARDown-0.0725157400
GSE13712_STATICUp0.1188653054
GSE19018Up0.1326364258
GSE19899_A1Down-0.1578576793
GSE19899_A2Up0.0729239594
PubMed_21979375_A1Down-0.0139085742
PubMed_21979375_A2Up0.1247609936
GSE35957Up0.0792278905
GSE36640Up0.0402485637
GSE54402Down-0.0412934848
GSE9593Down-0.0848181386
GSE43922Up0.0312351801
GSE24585Down-0.0062736923
GSE37065Down-0.0343371700
GSE28863_A1Down-0.0536314939
GSE28863_A2Up0.0593137391
GSE28863_A3Up0.1151143336
GSE28863_A4Up0.0497993532
GSE48662Down-0.0193371195

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.