HCSGD entry for TMEM54

1. General information

Official gene symbolTMEM54
Entrez ID113452
Gene full nametransmembrane protein 54
Other gene symbolsBCLP CAC-1 CAC1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0008150Biological_processNDbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.54982267010.02907598880.99999024730.3232834459

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.2880367448
GSE13712_SHEARDown-0.2782445047
GSE13712_STATICDown-0.0904382995
GSE19018Up0.5359564816
GSE19899_A1Down-0.7822556903
GSE19899_A2Down-0.2959007412
PubMed_21979375_A1Down-0.1692852236
PubMed_21979375_A2Down-0.8964293393
GSE35957Down-1.8090103559
GSE36640Up0.1958041570
GSE54402Down-0.0568071143
GSE9593Up0.7031459485
GSE43922Down-0.1842100943
GSE24585Up0.4188826119
GSE37065Up0.0483088564
GSE28863_A1Down-0.5789785534
GSE28863_A2Up0.1097596683
GSE28863_A3Down-0.0033303013
GSE28863_A4Down-0.1287847281
GSE48662Up0.3318661375

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-124-3pMIMAT0000422MIRT022477MicroarrayFunctional MTI (Weak)18668037
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.