HCSGD entry for TMEM54
1. General information
| Official gene symbol | TMEM54 |
|---|---|
| Entrez ID | 113452 |
| Gene full name | transmembrane protein 54 |
| Other gene symbols | BCLP CAC-1 CAC1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5498226701 | 0.0290759888 | 0.9999902473 | 0.3232834459 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2880367448 |
| GSE13712_SHEAR | Down | -0.2782445047 |
| GSE13712_STATIC | Down | -0.0904382995 |
| GSE19018 | Up | 0.5359564816 |
| GSE19899_A1 | Down | -0.7822556903 |
| GSE19899_A2 | Down | -0.2959007412 |
| PubMed_21979375_A1 | Down | -0.1692852236 |
| PubMed_21979375_A2 | Down | -0.8964293393 |
| GSE35957 | Down | -1.8090103559 |
| GSE36640 | Up | 0.1958041570 |
| GSE54402 | Down | -0.0568071143 |
| GSE9593 | Up | 0.7031459485 |
| GSE43922 | Down | -0.1842100943 |
| GSE24585 | Up | 0.4188826119 |
| GSE37065 | Up | 0.0483088564 |
| GSE28863_A1 | Down | -0.5789785534 |
| GSE28863_A2 | Up | 0.1097596683 |
| GSE28863_A3 | Down | -0.0033303013 |
| GSE28863_A4 | Down | -0.1287847281 |
| GSE48662 | Up | 0.3318661375 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022477 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
