HCSGD entry for C1orf85

1. General information

Official gene symbolC1orf85
Entrez ID112770
Gene full namechromosome 1 open reading frame 85
Other gene symbolsNCU-G1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003700Sequence-specific DNA binding transcription factor activityIMPmolecular_function
GO:0004879Ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activityIMPmolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005764LysosomeIDAcellular_component
GO:0005765Lysosomal membraneIEAcellular_component
GO:0005829CytosolIDAcellular_component
GO:0006366Transcription from RNA polymerase II promoterIMPbiological_process
GO:0016021Integral component of membraneISScellular_component
GO:0030374Ligand-dependent nuclear receptor transcription coactivator activityIDAmolecular_function
GO:0030522Intracellular receptor signaling pathwayIMPbiological_process
GO:0044212Transcription regulatory region DNA bindingIDAmolecular_function
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.01001298580.89196317390.25504593811.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.7474544153
GSE13712_SHEARDown-0.2656573832
GSE13712_STATICDown-0.0461984130
GSE19018Up0.2925701591
GSE19899_A1Up0.2449031476
GSE19899_A2Up1.0013178022
PubMed_21979375_A1Up0.2974946913
PubMed_21979375_A2Up0.7574961625
GSE35957Up0.1932922874
GSE36640Up1.1319055366
GSE54402Down-0.0152248810
GSE9593Up1.0528344011
GSE43922Up0.3799445703
GSE24585Up0.3974690207
GSE37065Up0.4263971055
GSE28863_A1Down-0.1382354977
GSE28863_A2Up0.5874868478
GSE28863_A3Down-0.5427596713
GSE28863_A4Down-0.4012721369
GSE48662Down-0.2354957541

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-124-3pMIMAT0000422MIRT022683MicroarrayFunctional MTI (Weak)18668037
hsa-miR-652-3pMIMAT0003322MIRT039517CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.