HCSGD entry for C1orf85

1. General information

Official gene symbolC1orf85
Entrez ID112770
Gene full namechromosome 1 open reading frame 85
Other gene symbolsNCU-G1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003700Sequence-specific DNA binding transcription factor activityIMPmolecular_function
GO:0004879Ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activityIMPmolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005764LysosomeIDAcellular_component
GO:0005765Lysosomal membraneIEAcellular_component
GO:0005829CytosolIDAcellular_component
GO:0006366Transcription from RNA polymerase II promoterIMPbiological_process
GO:0016021Integral component of membraneISScellular_component
GO:0030374Ligand-dependent nuclear receptor transcription coactivator activityIDAmolecular_function
GO:0030522Intracellular receptor signaling pathwayIMPbiological_process
GO:0044212Transcription regulatory region DNA bindingIDAmolecular_function
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.01001298580.89196317390.25504593811.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.7474544153
GSE13712_SHEARDown-0.2656573832
GSE13712_STATICDown-0.0461984130
GSE19018Up0.2925701591
GSE19899_A1Up0.2449031476
GSE19899_A2Up1.0013178022
PubMed_21979375_A1Up0.2974946913
PubMed_21979375_A2Up0.7574961625
GSE35957Up0.1932922874
GSE36640Up1.1319055366
GSE54402Down-0.0152248810
GSE9593Up1.0528344011
GSE43922Up0.3799445703
GSE24585Up0.3974690207
GSE37065Up0.4263971055
GSE28863_A1Down-0.1382354977
GSE28863_A2Up0.5874868478
GSE28863_A3Down-0.5427596713
GSE28863_A4Down-0.4012721369
GSE48662Down-0.2354957541

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-124-3pMIMAT0000422MIRT022683MicroarrayFunctional MTI (Weak)18668037
hsa-miR-652-3pMIMAT0003322MIRT039517CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.