HCSGD entry for POMT1
1. General information
| Official gene symbol | POMT1 |
|---|---|
| Entrez ID | 10585 |
| Gene full name | protein-O-mannosyltransferase 1 |
| Other gene symbols | LGMD2K MDDGA1 MDDGB1 MDDGC1 RT |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000030 | Mannosyltransferase activity | IEA TAS | molecular_function |
| GO:0001669 | Acrosomal vesicle | IEA | cellular_component |
| GO:0004169 | Dolichyl-phosphate-mannose-protein mannosyltransferase activity | IEA | molecular_function |
| GO:0005783 | Endoplasmic reticulum | TAS | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IDA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006493 | Protein O-linked glycosylation | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | TAS | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016529 | Sarcoplasmic reticulum | IEA | cellular_component |
| GO:0030198 | Extracellular matrix organization | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0097502 | Mannosylation | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0303902321 | 0.9272853957 | 0.4035828961 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0025923315 |
| GSE13712_SHEAR | Down | -0.1961434492 |
| GSE13712_STATIC | Up | 0.2286207419 |
| GSE19018 | Up | 0.2695466023 |
| GSE19899_A1 | Down | -0.1869109521 |
| GSE19899_A2 | Up | 0.6530648842 |
| PubMed_21979375_A1 | Up | 0.5309467799 |
| PubMed_21979375_A2 | Up | 1.8479081532 |
| GSE35957 | Down | -0.1511768311 |
| GSE36640 | Up | 1.1472449226 |
| GSE54402 | Down | -0.2309116366 |
| GSE9593 | Up | 0.6074751861 |
| GSE43922 | Up | 0.3617645599 |
| GSE24585 | Down | -0.0907621757 |
| GSE37065 | Down | -0.1061600861 |
| GSE28863_A1 | Up | 0.1755524726 |
| GSE28863_A2 | Up | 0.0865170168 |
| GSE28863_A3 | Up | 0.0314300602 |
| GSE28863_A4 | Up | 0.1236814013 |
| GSE48662 | Up | 0.2936643392 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
