HCSGD entry for POMT1

1. General information

Official gene symbolPOMT1
Entrez ID10585
Gene full nameprotein-O-mannosyltransferase 1
Other gene symbolsLGMD2K MDDGA1 MDDGB1 MDDGC1 RT
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000030Mannosyltransferase activityIEA TASmolecular_function
GO:0001669Acrosomal vesicleIEAcellular_component
GO:0004169Dolichyl-phosphate-mannose-protein mannosyltransferase activityIEAmolecular_function
GO:0005783Endoplasmic reticulumTAScellular_component
GO:0005789Endoplasmic reticulum membraneIDAcellular_component
GO:0005975Carbohydrate metabolic processTASbiological_process
GO:0006493Protein O-linked glycosylationIEAbiological_process
GO:0007275Multicellular organismal developmentTASbiological_process
GO:0016020MembraneIEAcellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0016529Sarcoplasmic reticulumIEAcellular_component
GO:0030198Extracellular matrix organizationIEAbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
GO:0097502MannosylationTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.03039023210.92728539570.40358289611.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0025923315
GSE13712_SHEARDown-0.1961434492
GSE13712_STATICUp0.2286207419
GSE19018Up0.2695466023
GSE19899_A1Down-0.1869109521
GSE19899_A2Up0.6530648842
PubMed_21979375_A1Up0.5309467799
PubMed_21979375_A2Up1.8479081532
GSE35957Down-0.1511768311
GSE36640Up1.1472449226
GSE54402Down-0.2309116366
GSE9593Up0.6074751861
GSE43922Up0.3617645599
GSE24585Down-0.0907621757
GSE37065Down-0.1061600861
GSE28863_A1Up0.1755524726
GSE28863_A2Up0.0865170168
GSE28863_A3Up0.0314300602
GSE28863_A4Up0.1236814013
GSE48662Up0.2936643392

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.