HCSGD entry for SLC23A2
1. General information
Official gene symbol | SLC23A2 |
---|---|
Entrez ID | 9962 |
Gene full name | solute carrier family 23 (nucleobase transporters), member 2 |
Other gene symbols | NBTL1 SLC23A1 SVCT2 YSPL2 |
Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
---|---|---|---|
GO:0005215 | Transporter activity | IEA | molecular_function |
GO:0005737 | Cytoplasm | IEA | cellular_component |
GO:0005886 | Plasma membrane | IDA TAS | cellular_component |
GO:0005887 | Integral component of plasma membrane | IEA | cellular_component |
GO:0006139 | Nucleobase-containing compound metabolic process | TAS | biological_process |
GO:0006766 | Vitamin metabolic process | TAS | biological_process |
GO:0006767 | Water-soluble vitamin metabolic process | TAS | biological_process |
GO:0006979 | Response to oxidative stress | IEA | biological_process |
GO:0008520 | L-ascorbate:sodium symporter activity | IEA | molecular_function |
GO:0008523 | Sodium-dependent multivitamin transmembrane transporter activity | NAS | molecular_function |
GO:0009925 | Basal plasma membrane | IEA | cellular_component |
GO:0015205 | Nucleobase transmembrane transporter activity | TAS | molecular_function |
GO:0015229 | L-ascorbic acid transporter activity | IDA | molecular_function |
GO:0015851 | Nucleobase transport | TAS | biological_process |
GO:0015882 | L-ascorbic acid transport | IDA | biological_process |
GO:0015931 | Nucleobase-containing compound transport | TAS | biological_process |
GO:0015993 | Molecular hydrogen transport | NAS | biological_process |
GO:0016020 | Membrane | IEA TAS | cellular_component |
GO:0016021 | Integral component of membrane | NAS | cellular_component |
GO:0016323 | Basolateral plasma membrane | IDA | cellular_component |
GO:0016324 | Apical plasma membrane | IDA | cellular_component |
GO:0019852 | L-ascorbic acid metabolic process | NAS TAS | biological_process |
GO:0034219 | Carbohydrate transmembrane transport | IDA | biological_process |
GO:0034220 | Ion transmembrane transport | IDA NAS | biological_process |
GO:0035461 | Vitamin transmembrane transport | IDA NAS | biological_process |
GO:0035725 | Sodium ion transmembrane transport | IDA NAS | biological_process |
GO:0044281 | Small molecule metabolic process | TAS | biological_process |
GO:0055085 | Transmembrane transport | IEA | biological_process |
GO:0070890 | Sodium-dependent L-ascorbate transmembrane transporter activity | IDA | molecular_function |
GO:0070904 | Transepithelial L-ascorbic acid transport | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
p-value up | p-value down | FDR up | FDR down |
---|---|---|---|
0.5837025417 | 0.2154975989 | 0.9999902473 | 0.8951825154 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
Data source | Up or down | Log fold change |
---|---|---|
GSE11954 | Up | 0.0375434102 |
GSE13712_SHEAR | Down | -0.1580832599 |
GSE13712_STATIC | Down | -0.1763559487 |
GSE19018 | Down | -0.0857234758 |
GSE19899_A1 | Down | -0.1107066804 |
GSE19899_A2 | Down | -0.1081053467 |
PubMed_21979375_A1 | Down | -0.6555854030 |
PubMed_21979375_A2 | Down | -0.1355410447 |
GSE35957 | Up | 0.2138642493 |
GSE36640 | Up | 0.3646560414 |
GSE54402 | Down | -0.2951662397 |
GSE9593 | Up | 0.2308442283 |
GSE43922 | Down | -0.4635971919 |
GSE24585 | Down | -0.1583391113 |
GSE37065 | Up | 0.0264569589 |
GSE28863_A1 | Up | 0.8400602862 |
GSE28863_A2 | Up | 0.4340026822 |
GSE28863_A3 | Down | -0.3578753587 |
GSE28863_A4 | Down | -0.1382549866 |
GSE48662 | Up | 0.1693922475 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
---|---|---|---|---|---|
hsa-miR-320b | MIMAT0005792 | MIRT036183 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-196b-5p | MIMAT0001080 | MIRT042667 | CLASH | Functional MTI (Weak) | 23622248 |
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