HCSGD entry for CTSF
1. General information
| Official gene symbol | CTSF |
|---|---|
| Entrez ID | 8722 |
| Gene full name | cathepsin F |
| Other gene symbols | CATSF CLN13 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004197 | Cysteine-type endopeptidase activity | TAS | molecular_function |
| GO:0005764 | Lysosome | TAS | cellular_component |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0008219 | Cell death | IEA | biological_process |
| GO:0008234 | Cysteine-type peptidase activity | IEA | molecular_function |
| GO:0019886 | Antigen processing and presentation of exogenous peptide antigen via MHC class II | TAS | biological_process |
| GO:0043202 | Lysosomal lumen | TAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0742917746 | 0.0487173892 | 0.5786908930 | 0.4128161571 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0818022224 |
| GSE13712_SHEAR | Down | -1.1938590611 |
| GSE13712_STATIC | Down | -0.1455531562 |
| GSE19018 | Down | -0.0502982933 |
| GSE19899_A1 | Down | -0.3553977919 |
| GSE19899_A2 | Down | -0.2152916103 |
| PubMed_21979375_A1 | Down | -1.0643933828 |
| PubMed_21979375_A2 | Down | -0.2370726562 |
| GSE35957 | Up | 0.6305071730 |
| GSE36640 | Up | 0.6906813549 |
| GSE54402 | Down | -0.7444629257 |
| GSE9593 | Up | 0.7854796450 |
| GSE43922 | Up | 0.0005158695 |
| GSE24585 | Down | -0.0620312325 |
| GSE37065 | Up | 0.1298228885 |
| GSE28863_A1 | Up | 0.8709855798 |
| GSE28863_A2 | Up | 0.9546069689 |
| GSE28863_A3 | Up | 0.3014030872 |
| GSE28863_A4 | Down | -0.5257663371 |
| GSE48662 | Up | 0.6804520317 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| [1-(1-Methyl-4,5-Dioxo-Pent-2-Enylcarbamoyl)-2-Phenyl-Ethyl]-Carbamic Acid Benzyl Ester | DB01810 | EXPT00058 |
| [1-(1-Benzyl-3-Hydroxy-2-Oxo-Propylcarbamoyl)-2-Phenyl-Ethyl]-Carbamic Acid Benzyl Ester | DB01871 | EXPT02989 |
| 4-Morpholin-4-Yl-Piperidine-1-Carboxylic Acid [1-(3-Benzenesulfonyl-1-Propyl-Allylcarbamoyl)-2-Phenylethyl]-Amide | DB02243 | EXPT02269 |
| Benzoyl-Arginine-Alanine-Methyl Ketone | DB03536 | EXPT03294 |
| WRR-99 | DB03573 | EXPT02751 |
| WRR-112 | DB03691 | EXPT02790 |
| HOMOPHENYLALANINYLMETHANE | DB07913 | - |
| BENZOYL-TYROSINE-ALANINE-METHYL KETONE | DB08775 | - |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018210 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
