HCSGD entry for SLC4A4

1. General information

Official gene symbolSLC4A4
Entrez ID8671
Gene full namesolute carrier family 4, sodium bicarbonate cotransporter, member 4
Other gene symbolsHNBC1 KNBC NBC1 NBC2 NBCe1-A SLC4A5 hhNMC pNBC
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005452Inorganic anion exchanger activityIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005886Plasma membraneTAScellular_component
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0006810TransportTASbiological_process
GO:0006811Ion transportTASbiological_process
GO:0008510Sodium:bicarbonate symporter activityTASmolecular_function
GO:0015698Inorganic anion transportTASbiological_process
GO:0015701Bicarbonate transportTASbiological_process
GO:0016323Basolateral plasma membraneIEAcellular_component
GO:0034220Ion transmembrane transportTASbiological_process
GO:0035725Sodium ion transmembrane transportTASbiological_process
GO:0055085Transmembrane transportTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.95244470570.00155483450.99999024730.0760460111

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.4463540772
GSE13712_SHEARDown-0.0494599057
GSE13712_STATICUp0.0580608386
GSE19018Down-0.6243369050
GSE19899_A1Down-0.8505477148
GSE19899_A2Down-1.0811525647
PubMed_21979375_A1Down-1.0519873286
PubMed_21979375_A2Down-1.3456041230
GSE35957Up0.2017811409
GSE36640Up1.5162447531
GSE54402Down-1.5367612415
GSE9593Down-0.2850436113
GSE43922Down-0.5912261251
GSE24585Down-0.2691877800
GSE37065Down-0.0533606146
GSE28863_A1Down-0.8065184066
GSE28863_A2Down-0.3594161623
GSE28863_A3Down-0.7998427392
GSE28863_A4Down-0.2195560372
GSE48662Down-0.2956022413

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.