HCSGD entry for GCM1

1. General information

Official gene symbolGCM1
Entrez ID8521
Gene full nameglial cells missing homolog 1 (Drosophila)
Other gene symbolsGCMA hGCMa
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003677DNA bindingIEAmolecular_function
GO:0003700Sequence-specific DNA binding transcription factor activityIDAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0005667Transcription factor complexIDAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIDAbiological_process
GO:0008134Transcription factor bindingIPImolecular_function
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0009653Anatomical structure morphogenesisTASbiological_process
GO:0060018Astrocyte fate commitmentIEAbiological_process
GO:0060143Positive regulation of syncytium formation by plasma membrane fusionIEAbiological_process
GO:0060670Branching involved in labyrinthine layer morphogenesisIEAbiological_process
GO:0060706Cell differentiation involved in embryonic placenta developmentIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.57890215040.80423039400.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0779582212
GSE13712_SHEARDown-0.0513044167
GSE13712_STATICDown-0.2371908020
GSE19018Down-0.0061551288
GSE19899_A1Down-0.0456994039
GSE19899_A2Up0.1548852095
PubMed_21979375_A1Up0.0940069474
PubMed_21979375_A2Down-0.0348479498
GSE35957Up0.0072400548
GSE36640Up0.1162113322
GSE54402Down-0.0389026326
GSE9593Up0.0010093800
GSE43922Up0.0184138953
GSE24585Down-0.0647054249
GSE37065Down-0.0746869830
GSE28863_A1Down-0.0966628712
GSE28863_A2Up0.0293966697
GSE28863_A3Up0.1680515588
GSE28863_A4Up0.1454073278
GSE48662Up0.7945959329

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-19b-3pMIMAT0000074MIRT007272Luciferase reporter assayFunctional MTI23438603
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.