HCSGD entry for OFD1
1. General information
| Official gene symbol | OFD1 |
|---|---|
| Entrez ID | 8481 |
| Gene full name | oral-facial-digital syndrome 1 |
| Other gene symbols | 71-7A CXorf5 JBTS10 RP23 SGBS2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000086 | G2/M transition of mitotic cell cycle | TAS | biological_process |
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0005814 | Centriole | IDA IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005929 | Cilium | IDA IEA | cellular_component |
| GO:0007067 | Mitosis | ISS | biological_process |
| GO:0007099 | Centriole replication | ISS | biological_process |
| GO:0015630 | Microtubule cytoskeleton | IDA | cellular_component |
| GO:0034451 | Centriolar satellite | ISS | cellular_component |
| GO:0036064 | Ciliary basal body | IDA | cellular_component |
| GO:0043014 | Alpha-tubulin binding | IEA ISS | molecular_function |
| GO:0043015 | Gamma-tubulin binding | IEA ISS | molecular_function |
| GO:0060271 | Cilium morphogenesis | IEA ISS | biological_process |
| GO:0060287 | Epithelial cilium movement involved in determination of left/right asymmetry | IEA ISS | biological_process |
| GO:0090307 | Spindle assembly involved in mitosis | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2889563504 | 0.7523346909 | 0.9868702997 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0797115604 |
| GSE13712_SHEAR | Up | 0.7904026983 |
| GSE13712_STATIC | Up | 0.4880078054 |
| GSE19018 | Down | -0.1792876524 |
| GSE19899_A1 | Up | 0.1109266022 |
| GSE19899_A2 | Up | 0.2836870960 |
| PubMed_21979375_A1 | Up | 0.0195007798 |
| PubMed_21979375_A2 | Up | 0.4299636357 |
| GSE35957 | Down | -0.1267918895 |
| GSE36640 | Down | -0.1118740434 |
| GSE54402 | Down | -0.1940982506 |
| GSE9593 | Down | -0.3828520670 |
| GSE43922 | Down | -0.0104930041 |
| GSE24585 | Down | -0.0668758841 |
| GSE37065 | Down | -0.0123707787 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.2805232536 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029155 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050901 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
