HCSGD entry for HIST1H2BC
1. General information
| Official gene symbol | HIST1H2BC |
|---|---|
| Entrez ID | 8347 |
| Gene full name | histone cluster 1, H2bc |
| Other gene symbols | H2B.1 H2B/l H2BFL dJ221C16.3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | NAS | cellular_component |
| GO:0003677 | DNA binding | NAS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006334 | Nucleosome assembly | NAS | biological_process |
| GO:0042742 | Defense response to bacterium | IEA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0000068576 | 0.9998288819 | 0.0115777778 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 2.3558630027 |
| GSE13712_SHEAR | Up | 3.0416054821 |
| GSE13712_STATIC | Up | 1.4718166243 |
| GSE19018 | Up | 0.4635435651 |
| GSE19899_A1 | Up | 2.4828612428 |
| GSE19899_A2 | Up | 4.2540523956 |
| PubMed_21979375_A1 | Up | 2.3418189639 |
| PubMed_21979375_A2 | Up | 3.8164361115 |
| GSE35957 | Up | 1.1439131785 |
| GSE36640 | Up | 5.5603179565 |
| GSE54402 | Up | 1.3064588300 |
| GSE9593 | Up | 1.5497186161 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.8061662698 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027695 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030061 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037389 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038429 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-625-5p | MIMAT0003294 | MIRT039589 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044515 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-31-5p | MIMAT0000089 | MIRT049862 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051239 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
