HCSGD entry for HIST1H2BC


1. General information

Official gene symbolHIST1H2BC
Entrez ID8347
Gene full namehistone cluster 1, H2bc
Other gene symbolsH2B.1 H2B/l H2BFL dJ221C16.3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000786NucleosomeNAScellular_component
GO:0003677DNA bindingNASmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006334Nucleosome assemblyNASbiological_process
GO:0042742Defense response to bacteriumIEAbiological_process
GO:0046982Protein heterodimerization activityIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.00000685760.99982888190.01157777781.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up2.3558630027
GSE13712_SHEARUp3.0416054821
GSE13712_STATICUp1.4718166243
GSE19018Up0.4635435651
GSE19899_A1Up2.4828612428
GSE19899_A2Up4.2540523956
PubMed_21979375_A1Up2.3418189639
PubMed_21979375_A2Up3.8164361115
GSE35957Up1.1439131785
GSE36640Up5.5603179565
GSE54402Up1.3064588300
GSE9593Up1.5497186161
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.8061662698

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-98-5pMIMAT0000096MIRT027695MicroarrayFunctional MTI (Weak)19088304
hsa-miR-26b-5pMIMAT0000083MIRT030061MicroarrayFunctional MTI (Weak)19088304
hsa-miR-744-5pMIMAT0004945MIRT037389CLASHFunctional MTI (Weak)23622248
hsa-miR-296-3pMIMAT0004679MIRT038429CLASHFunctional MTI (Weak)23622248
hsa-miR-625-5pMIMAT0003294MIRT039589CLASHFunctional MTI (Weak)23622248
hsa-miR-320aMIMAT0000510MIRT044515CLASHFunctional MTI (Weak)23622248
hsa-miR-31-5pMIMAT0000089MIRT049862CLASHFunctional MTI (Weak)23622248
hsa-miR-16-5pMIMAT0000069MIRT051239CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.