HCSGD entry for TRIM7


1. General information

Official gene symbolTRIM7
Entrez ID81786
Gene full nametripartite motif containing 7
Other gene symbolsGNIP RNF90
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005634NucleusIDAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0043231Intracellular membrane-bounded organelleIDAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.93929083620.25242706200.99999024730.9644553201

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0347705045
GSE13712_SHEARDown-0.3512785617
GSE13712_STATICDown-0.2164180749
GSE19018Up0.1678081758
GSE19899_A1Down-0.0140832675
GSE19899_A2Down-0.1295903403
PubMed_21979375_A1Down-0.3053204176
PubMed_21979375_A2Down-0.1910528063
GSE35957Down-0.0190955446
GSE36640Down-0.4534430211
GSE54402Down-0.0774206295
GSE9593Down-0.0742689185
GSE43922Up0.0148866404
GSE24585Up0.0843738154
GSE37065Up0.0140646991
GSE28863_A1Up0.0015789803
GSE28863_A2Up0.1476191058
GSE28863_A3Up0.0620353519
GSE28863_A4Up0.0710098117
GSE48662Down-0.3950873595

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-124-3pMIMAT0000422MIRT022939MicroarrayFunctional MTI (Weak)18668037
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.