HCSGD entry for RXRG

1. General information

Official gene symbolRXRG
Entrez ID6258
Gene full nameretinoid X receptor, gamma
Other gene symbolsNR2B3 RXRC
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003707Steroid hormone receptor activityIEAmolecular_function
GO:00048869-cis retinoic acid receptor activityIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005654NucleoplasmTAScellular_component
GO:0006367Transcription initiation from RNA polymerase II promoterTASbiological_process
GO:0007422Peripheral nervous system developmentIEAbiological_process
GO:0007507Heart developmentIEAbiological_process
GO:0007519Skeletal muscle tissue developmentIEAbiological_process
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0010467Gene expressionTASbiological_process
GO:0030182Neuron differentiationIEAbiological_process
GO:0031641Regulation of myelinationIEAbiological_process
GO:0032526Response to retinoic acidIEAbiological_process
GO:0043565Sequence-specific DNA bindingIEAmolecular_function
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.54798454470.92314508950.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0495830558
GSE13712_SHEARUp0.0621864809
GSE13712_STATICUp0.1020610116
GSE19018Up0.0329368102
GSE19899_A1Up0.1080487802
GSE19899_A2Up0.0407078494
PubMed_21979375_A1Down-0.1533238523
PubMed_21979375_A2Down-0.0880150814
GSE35957Up0.1169018935
GSE36640Up0.0931073105
GSE54402Down-0.0454715719
GSE9593Up0.1150028732
GSE43922Up0.0138838903
GSE24585Up0.3651444224
GSE37065Up0.1064319993
GSE28863_A1Down-0.0444951608
GSE28863_A2Up0.1190483755
GSE28863_A3Up0.2252775619
GSE28863_A4Down-0.0098187156
GSE48662Up0.0040909353

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

AdapaleneDB00210 APRD00780
EtretinateDB00926 APRD00966

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.