HCSGD entry for JPH3

1. General information

Official gene symbolJPH3
Entrez ID57338
Gene full namejunctophilin 3
Other gene symbolsCAGL237 HDL2 JP-3 JP3 TNRC22
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007612LearningIEAbiological_process
GO:0007613MemoryIEAbiological_process
GO:0014701Junctional sarcoplasmic reticulum membraneTAScellular_component
GO:0015278Calcium-release channel activityIEAmolecular_function
GO:0016021Integral component of membraneNAScellular_component
GO:0030314Junctional membrane complexIEAcellular_component
GO:0035640Exploration behaviorIEAbiological_process
GO:0040011LocomotionIEAbiological_process
GO:0048168Regulation of neuronal synaptic plasticityIEAbiological_process
GO:0050885Neuromuscular process controlling balanceIEAbiological_process
GO:0060314Regulation of ryanodine-sensitive calcium-release channel activityTASbiological_process
GO:0060402Calcium ion transport into cytosolTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.60537101550.79694764640.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0339074476
GSE13712_SHEARDown-0.3604598737
GSE13712_STATICDown-0.1768940301
GSE19018Up0.0878958350
GSE19899_A1Up0.0781239137
GSE19899_A2Down-0.1426108314
PubMed_21979375_A1Down-0.0169591098
PubMed_21979375_A2Up0.1007178699
GSE35957Up0.1659799856
GSE36640Up0.0469691344
GSE54402Up0.0508725614
GSE9593Down-0.1110914795
GSE43922Up0.2532770476
GSE24585Up0.3164483488
GSE37065Up0.0275989821
GSE28863_A1Down-0.0895220785
GSE28863_A2Down-0.1338416145
GSE28863_A3Up0.2664573330
GSE28863_A4Up0.1062009859
GSE48662Down-0.0221255645

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.


PubMed ID of the article

Sentenece the gene occurs

24798380Human dermal fibroblast cells from the smoker group showed severe senescence following treatment with HDL2 and HDL3
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