HCSGD entry for SPOCK3
1. General information
| Official gene symbol | SPOCK3 |
|---|---|
| Entrez ID | 50859 |
| Gene full name | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 |
| Other gene symbols | HSAJ1454 TES-3 TICN3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005539 | Glycosaminoglycan binding | IEA | molecular_function |
| GO:0005578 | Proteinaceous extracellular matrix | IEA | cellular_component |
| GO:0005615 | Extracellular space | IDA | cellular_component |
| GO:0007165 | Signal transduction | IEA | biological_process |
| GO:0008191 | Metalloendopeptidase inhibitor activity | IDA IEA | molecular_function |
| GO:0010951 | Negative regulation of endopeptidase activity | IDA | biological_process |
| GO:0019800 | Peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan | IEA | biological_process |
| GO:0031012 | Extracellular matrix | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5329629193 | 0.8631593822 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1814700877 |
| GSE13712_SHEAR | Down | -0.0909335171 |
| GSE13712_STATIC | Down | -0.3867370666 |
| GSE19018 | Up | 0.1153213827 |
| GSE19899_A1 | Up | 0.1432036451 |
| GSE19899_A2 | Up | 0.0452750025 |
| PubMed_21979375_A1 | Down | -0.0878526977 |
| PubMed_21979375_A2 | Up | 0.1202077134 |
| GSE35957 | Up | 0.0954987667 |
| GSE36640 | Up | 0.0569176483 |
| GSE54402 | Up | 0.0970771696 |
| GSE9593 | Up | 0.0396628866 |
| GSE43922 | Up | 0.0110117443 |
| GSE24585 | Up | 0.3567962485 |
| GSE37065 | Down | -0.0396905487 |
| GSE28863_A1 | Down | -0.0573538838 |
| GSE28863_A2 | Up | 0.0488643204 |
| GSE28863_A3 | Up | 0.1721342864 |
| GSE28863_A4 | Down | -0.0215593647 |
| GSE48662 | Down | -0.0268845261 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
