HCSGD entry for LMO1

1. General information

Official gene symbolLMO1
Entrez ID4004
Gene full nameLIM domain only 1 (rhombotin 1)
Other gene symbolsRBTN1 RHOM1 TTG1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000122Negative regulation of transcription from RNA polymerase II promoterIEAbiological_process
GO:0005634NucleusIEA ISScellular_component
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIEA IMPbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.51658080620.89202236620.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1003728644
GSE13712_SHEARDown-0.0449703075
GSE13712_STATICUp0.2863943305
GSE19018Up0.0245881348
GSE19899_A1Up0.0150921772
GSE19899_A2Up0.2110597564
PubMed_21979375_A1Up0.0412721508
PubMed_21979375_A2Up0.0092110644
GSE35957Up0.2306517347
GSE36640Up0.0631788723
GSE54402Down-0.0101590193
GSE9593Up0.0247349686
GSE43922Up0.1100712984
GSE24585Up0.0157567417
GSE37065Down-0.0611583535
GSE28863_A1Down-0.0541323335
GSE28863_A2Down-0.1038664353
GSE28863_A3Up0.2903268690
GSE28863_A4Up0.1023534239
GSE48662Up0.1420760905

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.