HCSGD entry for RNF180
1. General information
| Official gene symbol | RNF180 |
|---|---|
| Entrez ID | 285671 |
| Gene full name | ring finger protein 180 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004842 | Ubiquitin-protein ligase activity | IEA | molecular_function |
| GO:0005635 | Nuclear envelope | IEA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031227 | Intrinsic component of endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0031624 | Ubiquitin conjugating enzyme binding | IEA | molecular_function |
| GO:0032436 | Positive regulation of proteasomal ubiquitin-dependent protein catabolic process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4388066601 | 0.1888278067 | 0.9999902473 | 0.8422532961 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0137497474 |
| GSE13712_SHEAR | Down | -0.7016117767 |
| GSE13712_STATIC | Down | -0.1279664677 |
| GSE19018 | Up | 0.0492532371 |
| GSE19899_A1 | Up | 0.0332772732 |
| GSE19899_A2 | Down | -0.2480658570 |
| PubMed_21979375_A1 | Up | 0.1058647194 |
| PubMed_21979375_A2 | Up | 0.1159039830 |
| GSE35957 | Down | -0.1774646583 |
| GSE36640 | Up | 0.0382412303 |
| GSE54402 | Up | 0.0513627179 |
| GSE9593 | Down | -0.2460724023 |
| GSE43922 | Up | 0.0231982866 |
| GSE24585 | Up | 0.6633492910 |
| GSE37065 | Down | -0.2517788370 |
| GSE28863_A1 | Down | -0.2906205918 |
| GSE28863_A2 | Down | -0.2069717350 |
| GSE28863_A3 | Up | 0.5899586857 |
| GSE28863_A4 | Down | -0.1147864834 |
| GSE48662 | Up | 0.1041788638 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
