HCSGD entry for FOXD2

1. General information

Official gene symbolFOXD2
Entrez ID2306
Gene full nameforkhead box D2
Other gene symbolsFKHL17 FREAC-9 FREAC9
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000122Negative regulation of transcription from RNA polymerase II promoterIBAbiological_process
GO:0001658Branching involved in ureteric bud morphogenesisIBAbiological_process
GO:0001755Neural crest cell migrationIBAbiological_process
GO:0001822Kidney developmentIBAbiological_process
GO:0003690Double-stranded DNA bindingIBAmolecular_function
GO:0003700Sequence-specific DNA binding transcription factor activityTASmolecular_function
GO:0003705RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activityIBAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0005667Transcription factor complexIBAcellular_component
GO:0006366Transcription from RNA polymerase II promoterIBAbiological_process
GO:0007389Pattern specification processIBAbiological_process
GO:0007422Peripheral nervous system developmentIBAbiological_process
GO:0008134Transcription factor bindingIBAmolecular_function
GO:0008301DNA binding, bendingIBAmolecular_function
GO:0009790Embryo developmentIBAbiological_process
GO:0030318Melanocyte differentiationIBAbiological_process
GO:0043565Sequence-specific DNA bindingIEAmolecular_function
GO:0045944Positive regulation of transcription from RNA polymerase II promoterIBAbiological_process
GO:0048484Enteric nervous system developmentIBAbiological_process
GO:0048485Sympathetic nervous system developmentIBAbiological_process
GO:0048846Axon extension involved in axon guidanceIBAbiological_process
GO:0048937Lateral line nerve glial cell developmentIBAbiological_process
GO:0050935Iridophore differentiationIBAbiological_process
GO:0051090Regulation of sequence-specific DNA binding transcription factor activityIBAbiological_process
GO:0051216Cartilage developmentIBAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.16911430420.94260449450.80946673941.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0406148887
GSE13712_SHEARUp0.0391807542
GSE13712_STATICDown-0.0729209131
GSE19018Up0.1422388797
GSE19899_A1Up0.2172404465
GSE19899_A2Down-0.0168791491
PubMed_21979375_A1Up0.3004456621
PubMed_21979375_A2Up0.2782541709
GSE35957Up0.0145886839
GSE36640Down-0.1324310531
GSE54402Up0.0046551553
GSE9593Up0.0654798030
GSE43922Up0.2322828375
GSE24585Up0.1568281323
GSE37065Down-0.1174359409
GSE28863_A1Up0.0716360787
GSE28863_A2Up0.1241431245
GSE28863_A3Up0.3704791366
GSE28863_A4Up0.1422984393
GSE48662Up0.0642694335

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT018455MicroarrayFunctional MTI (Weak)18185580
hsa-miR-26b-5pMIMAT0000083MIRT029980MicroarrayFunctional MTI (Weak)19088304
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.