HCSGD entry for PTCHD1


1. General information

Official gene symbolPTCHD1
Entrez ID139411
Gene full namepatched domain containing 1
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005886Plasma membraneIDAcellular_component
GO:0007224Smoothened signaling pathwayIDAbiological_process
GO:0008158Hedgehog receptor activityIEAmolecular_function
GO:0016021Integral component of membraneIEAcellular_component
GO:0050890CognitionIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.93645277160.08391967250.99999024730.5501493649

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0149059928
GSE13712_SHEARUp0.2069718471
GSE13712_STATICDown-0.1159995772
GSE19018Down-0.0407115913
GSE19899_A1Up0.0149721790
GSE19899_A2Down-0.0190223224
PubMed_21979375_A1Down-0.0414623280
PubMed_21979375_A2Down-0.1124647750
GSE35957Up0.0749425138
GSE36640Up0.0181363401
GSE54402Up0.1685288456
GSE9593Up0.0388534909
GSE43922Down-0.0428905487
GSE24585Down-1.8385449701
GSE37065Down-0.0530094205
GSE28863_A1Down-0.3642082307
GSE28863_A2Up0.0105104322
GSE28863_A3Up0.1394846253
GSE28863_A4Down-0.0680148317
GSE48662Down-0.0471474473

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-128-3pMIMAT0000424MIRT021976MicroarrayFunctional MTI (Weak)17612493
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.