HCSGD entry for SHROOM1

1. General information

Official gene symbolSHROOM1
Entrez ID134549
Gene full nameshroom family member 1
Other gene symbolsAPXL2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000902Cell morphogenesisIEA ISSbiological_process
GO:0005737CytoplasmIEAcellular_component
GO:0005874MicrotubuleIEAcellular_component
GO:0016460Myosin II complexIEA ISScellular_component
GO:0051015Actin filament bindingIEA ISSmolecular_function
GO:0051017Actin filament bundle assemblyIEA ISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.20638035410.95823211500.87558628301.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0934640978
GSE13712_SHEARDown-0.0565267358
GSE13712_STATICUp0.0599746425
GSE19018Up0.0100517801
GSE19899_A1Up0.0762667523
GSE19899_A2Up0.7167731493
PubMed_21979375_A1Down-0.0993779309
PubMed_21979375_A2Up0.4827276631
GSE35957Down-0.1864135656
GSE36640Up0.2158185414
GSE54402Up0.0500292858
GSE9593Up0.0018423072
GSE43922Up0.4481933333
GSE24585Up0.1716957961
GSE37065Down-0.0279651365
GSE28863_A1Down-0.0733938113
GSE28863_A2Up0.0390657959
GSE28863_A3Up0.1209786526
GSE28863_A4Down-0.0398924563
GSE48662Up0.2398382323

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.