HCSGD entry for SEMA3A

1. General information

Official gene symbolSEMA3A
Entrez ID10371
Gene full namesema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
Other gene symbolsCOLL1 Hsema-I Hsema-III SEMA1 SEMAD SEMAIII SEMAL SemD coll-1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001764Neuron migrationIEA ISSbiological_process
GO:0002027Regulation of heart rateIEAbiological_process
GO:0004872Receptor activityIEAmolecular_function
GO:0005576Extracellular regionTAScellular_component
GO:0006915Apoptotic processIEAbiological_process
GO:0007411Axon guidanceTASbiological_process
GO:0007413Axonal fasciculationIEAbiological_process
GO:0010633Negative regulation of epithelial cell migrationIEAbiological_process
GO:0016020MembraneIEAcellular_component
GO:0021675Nerve developmentISSbiological_process
GO:0021772Olfactory bulb developmentIMPbiological_process
GO:0030215Semaphorin receptor bindingIEAmolecular_function
GO:0030424AxonIEAcellular_component
GO:0030425DendriteIEAcellular_component
GO:0045499Chemorepellent activityIEA TASmolecular_function
GO:0048485Sympathetic nervous system developmentTASbiological_process
GO:0048813Dendrite morphogenesisIEAbiological_process
GO:0048841Regulation of axon extension involved in axon guidanceIDAbiological_process
GO:0048843Negative regulation of axon extension involved in axon guidanceIEAbiological_process
GO:0048846Axon extension involved in axon guidanceIEA ISSbiological_process
GO:0048880Sensory system developmentTASbiological_process
GO:0060385Axonogenesis involved in innervationIEA ISSbiological_process
GO:0060666Dichotomous subdivision of terminal units involved in salivary gland branchingIEAbiological_process
GO:0061549Sympathetic ganglion developmentIEA ISSbiological_process
GO:0071526Semaphorin-plexin signaling pathwayTASbiological_process
GO:0097490Sympathetic neuron projection extensionIEA ISSbiological_process
GO:0097491Sympathetic neuron projection guidanceIEA ISSbiological_process
GO:1902285Semaphorin-plexin signaling pathway involved in neuron projection guidanceIEA ISSbiological_process
GO:2001224Positive regulation of neuron migrationIEAbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.01474586830.07908655830.30251441930.5317081226

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.5954885341
GSE13712_SHEARUp2.0829447399
GSE13712_STATICUp2.1521535317
GSE19018Down-0.1662821582
GSE19899_A1Up0.0260243189
GSE19899_A2Down-1.3383711081
PubMed_21979375_A1Down-0.1686977678
PubMed_21979375_A2Down-0.4527393230
GSE35957Up1.2660858852
GSE36640Down-0.0806289374
GSE54402Down-0.5509396938
GSE9593Up0.1671519856
GSE43922Up0.1052871423
GSE24585Down-0.7869230939
GSE37065Up1.3627932201
GSE28863_A1Up0.0789374666
GSE28863_A2Up0.7886146209
GSE28863_A3Down-1.1281054982
GSE28863_A4Up0.1552173943
GSE48662Down-0.3135240728

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.