HCSGD entry for HNRPDL
1. General information
| Official gene symbol | HNRPDL |
|---|---|
| Entrez ID | 9987 |
| Gene full name | heterogeneous nuclear ribonucleoprotein D-like |
| Other gene symbols | HNRNP JKTBP JKTBP2 laAUF1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003690 | Double-stranded DNA binding | IDA | molecular_function |
| GO:0003697 | Single-stranded DNA binding | IDA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0005681 | Spliceosomal complex | NAS | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0006396 | RNA processing | NAS | biological_process |
| GO:0008143 | Poly(A) binding | IDA | molecular_function |
| GO:0010468 | Regulation of gene expression | IDA | biological_process |
| GO:0034046 | Poly(G) binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9982434558 | 0.0089077771 | 0.9999902473 | 0.1869709729 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0867503352 |
| GSE13712_SHEAR | Down | -0.1029216869 |
| GSE13712_STATIC | Down | -0.3410551742 |
| GSE19018 | Down | -0.4582868966 |
| GSE19899_A1 | Down | -0.5858668765 |
| GSE19899_A2 | Down | -0.5165113527 |
| PubMed_21979375_A1 | Down | -0.6768472724 |
| PubMed_21979375_A2 | Down | -0.8106412238 |
| GSE35957 | Down | -0.2247477236 |
| GSE36640 | Down | -0.6248418253 |
| GSE54402 | Down | -0.1931754229 |
| GSE9593 | Down | -0.4649358228 |
| GSE43922 | Down | -0.3406096068 |
| GSE24585 | Down | -0.1966912139 |
| GSE37065 | Down | -0.1698295773 |
| GSE28863_A1 | Up | 0.0645029212 |
| GSE28863_A2 | Up | 0.1005470017 |
| GSE28863_A3 | Up | 0.0066945552 |
| GSE28863_A4 | Down | -0.1076015259 |
| GSE48662 | Down | -0.5976800252 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT004948 | qRT-PCR | Functional MTI (Weak) | 17942906 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT004954 | qRT-PCR | Functional MTI (Weak) | 17942906 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT004964 | qRT-PCR | Functional MTI (Weak) | 17942906 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT027879 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031982 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-339-5p | MIMAT0000764 | MIRT042792 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-378a-5p | MIMAT0000731 | MIRT043969 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047859 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
