HCSGD entry for RNF10
1. General information
| Official gene symbol | RNF10 |
|---|---|
| Entrez ID | 9921 |
| Gene full name | ring finger protein 10 |
| Other gene symbols | RIE2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA ISS | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0010626 | Negative regulation of Schwann cell proliferation | IEA ISS | biological_process |
| GO:0031643 | Positive regulation of myelination | IEA ISS | biological_process |
| GO:0044212 | Transcription regulatory region DNA binding | IEA ISS | molecular_function |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IEA ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0280120018 | 0.9857255841 | 0.3878505523 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0824912492 |
| GSE13712_SHEAR | Down | -0.0496296829 |
| GSE13712_STATIC | Up | 0.0034566939 |
| GSE19018 | Up | 0.1281316677 |
| GSE19899_A1 | Up | 0.1167640148 |
| GSE19899_A2 | Up | 0.6116832729 |
| PubMed_21979375_A1 | Up | 0.4439100596 |
| PubMed_21979375_A2 | Up | 0.8971795482 |
| GSE35957 | Down | -0.0146909382 |
| GSE36640 | Up | 0.8201446685 |
| GSE54402 | Up | 0.2737122688 |
| GSE9593 | Up | 0.2848294146 |
| GSE43922 | Up | 0.0991044526 |
| GSE24585 | Up | 0.0526543892 |
| GSE37065 | Down | -0.1685776241 |
| GSE28863_A1 | Up | 0.6586565643 |
| GSE28863_A2 | Up | 0.6848740709 |
| GSE28863_A3 | Down | -0.0582923287 |
| GSE28863_A4 | Up | 0.1182769999 |
| GSE48662 | Up | 0.1045811178 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-877-3p | MIMAT0004950 | MIRT036845 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-130b-5p | MIMAT0004680 | MIRT038323 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041789 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044532 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046718 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
