HCSGD entry for ZBTB39
1. General information
| Official gene symbol | ZBTB39 |
|---|---|
| Entrez ID | 9880 |
| Gene full name | zinc finger and BTB domain containing 39 |
| Other gene symbols | ZNF922 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5547559591 | 0.4128139280 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0275494162 |
| GSE13712_SHEAR | Down | -0.5926951670 |
| GSE13712_STATIC | Up | 0.0693685775 |
| GSE19018 | Down | -0.7116656054 |
| GSE19899_A1 | Up | 0.1162251519 |
| GSE19899_A2 | Up | 0.2800275285 |
| PubMed_21979375_A1 | Up | 0.8979462796 |
| PubMed_21979375_A2 | Down | -0.1361911041 |
| GSE35957 | Up | 0.1757083236 |
| GSE36640 | Down | -0.3319323934 |
| GSE54402 | Up | 0.1168722907 |
| GSE9593 | Up | 0.0274537979 |
| GSE43922 | Up | 0.0453643160 |
| GSE24585 | Down | -0.0446455792 |
| GSE37065 | Up | 0.1397193919 |
| GSE28863_A1 | Down | -0.0488346966 |
| GSE28863_A2 | Up | 0.1532026643 |
| GSE28863_A3 | Down | -0.2683016483 |
| GSE28863_A4 | Up | 0.0842051742 |
| GSE48662 | Down | -0.0800278289 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-548b-3p | MIMAT0003254 | MIRT016239 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027838 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032157 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044378 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
