HCSGD entry for LCMT2
1. General information
| Official gene symbol | LCMT2 |
|---|---|
| Entrez ID | 9836 |
| Gene full name | leucine carboxyl methyltransferase 2 |
| Other gene symbols | PPM2 TYW4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0008033 | TRNA processing | IEA | biological_process |
| GO:0008168 | Methyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8670366513 | 0.1905508035 | 0.9999902473 | 0.8462101738 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0476299145 |
| GSE13712_SHEAR | Up | 0.0793454797 |
| GSE13712_STATIC | Down | -0.0922941276 |
| GSE19018 | Down | -0.5471741718 |
| GSE19899_A1 | Down | -0.0657743188 |
| GSE19899_A2 | Up | 0.1115050913 |
| PubMed_21979375_A1 | Down | -0.0586918294 |
| PubMed_21979375_A2 | Up | 0.3291507701 |
| GSE35957 | Down | -0.1323889094 |
| GSE36640 | Down | -0.3277968765 |
| GSE54402 | Up | 0.0510875640 |
| GSE9593 | Down | -0.0362369063 |
| GSE43922 | Up | 0.0769682665 |
| GSE24585 | Down | -0.0495342462 |
| GSE37065 | Up | 0.1821401337 |
| GSE28863_A1 | Up | 0.0893899107 |
| GSE28863_A2 | Up | 0.0527585264 |
| GSE28863_A3 | Down | -0.4751593396 |
| GSE28863_A4 | Down | -0.1718539599 |
| GSE48662 | Down | -0.5503387349 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| L-Leucine | DB00149 | NUTR00033 |
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
