HCSGD entry for SPATA2
1. General information
| Official gene symbol | SPATA2 |
|---|---|
| Entrez ID | 9825 |
| Gene full name | spermatogenesis associated 2 |
| Other gene symbols | PD1 tamo |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007283 | Spermatogenesis | NAS | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0843678470 | 0.9342833555 | 0.6104029962 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0540689572 |
| GSE13712_SHEAR | Up | 0.4200961493 |
| GSE13712_STATIC | Up | 0.0304599367 |
| GSE19018 | Up | 0.0867560408 |
| GSE19899_A1 | Up | 0.1207934403 |
| GSE19899_A2 | Up | 0.6632872999 |
| PubMed_21979375_A1 | Up | 0.4997526526 |
| PubMed_21979375_A2 | Up | 1.0260162699 |
| GSE35957 | Down | -0.2522836433 |
| GSE36640 | Down | -0.1756289680 |
| GSE54402 | Up | 0.0075192929 |
| GSE9593 | Up | 0.1208276108 |
| GSE43922 | Up | 0.3656741835 |
| GSE24585 | Up | 0.1768099479 |
| GSE37065 | Down | -0.1122707295 |
| GSE28863_A1 | Up | 0.3481553770 |
| GSE28863_A2 | Up | 0.1620251653 |
| GSE28863_A3 | Up | 0.1258533052 |
| GSE28863_A4 | Down | -0.1750932605 |
| GSE48662 | Down | -0.0983800979 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020308 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025967 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026033 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-101-3p | MIMAT0000099 | MIRT027331 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT028290 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031273 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031994 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032133 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048858 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
