HCSGD entry for NUPL1
1. General information
| Official gene symbol | NUPL1 |
|---|---|
| Entrez ID | 9818 |
| Gene full name | nucleoporin like 1 |
| Other gene symbols | PRO2463 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0005487 | Nucleocytoplasmic transporter activity | IEA | molecular_function |
| GO:0005635 | Nuclear envelope | TAS | cellular_component |
| GO:0005643 | Nuclear pore | IEA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006913 | Nucleocytoplasmic transport | IEA | biological_process |
| GO:0007077 | Mitotic nuclear envelope disassembly | TAS | biological_process |
| GO:0008645 | Hexose transport | TAS | biological_process |
| GO:0010827 | Regulation of glucose transport | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0015758 | Glucose transport | TAS | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0019221 | Cytokine-mediated signaling pathway | TAS | biological_process |
| GO:0031965 | Nuclear membrane | IEA | cellular_component |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0051028 | MRNA transport | IEA | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1359106531 | 0.0805098401 | 0.7441912835 | 0.5366108833 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4549824017 |
| GSE13712_SHEAR | Up | 0.4593257099 |
| GSE13712_STATIC | Up | 0.3036277380 |
| GSE19018 | Down | -0.1579535449 |
| GSE19899_A1 | Up | 0.4597903768 |
| GSE19899_A2 | Up | 0.1408339674 |
| PubMed_21979375_A1 | Up | 1.5163655553 |
| PubMed_21979375_A2 | Up | 0.4015274719 |
| GSE35957 | Down | -0.7092257398 |
| GSE36640 | Down | -1.2278519492 |
| GSE54402 | Up | 0.4449892066 |
| GSE9593 | Down | -0.3432852083 |
| GSE43922 | Up | 0.3756061338 |
| GSE24585 | Down | -0.1190727860 |
| GSE37065 | Up | 0.1243794520 |
| GSE28863_A1 | Down | -0.3894116981 |
| GSE28863_A2 | Down | -0.0144527577 |
| GSE28863_A3 | Down | -0.7900898543 |
| GSE28863_A4 | Up | 0.2037817327 |
| GSE48662 | Down | -1.0375579259 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | MIRT002504 | Microarray//Microarray;Other | Functional MTI (Weak) | 15685193 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016328 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-375 | MIMAT0000728 | MIRT019762 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT025113 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT027963 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042540 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7c-5p | MIMAT0000064 | MIRT051820 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052612 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | NA | hsa-miR-373 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
