HCSGD entry for CKAP5
1. General information
| Official gene symbol | CKAP5 |
|---|---|
| Entrez ID | 9793 |
| Gene full name | cytoskeleton associated protein 5 |
| Other gene symbols | CHTOG MSPS TOG TOGp ch-TOG |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000086 | G2/M transition of mitotic cell cycle | TAS | biological_process |
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0000922 | Spindle pole | IDA | cellular_component |
| GO:0000930 | Gamma-tubulin complex | IDA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0007051 | Spindle organization | IMP | biological_process |
| GO:0007067 | Mitosis | IEA | biological_process |
| GO:0015630 | Microtubule cytoskeleton | ISS | cellular_component |
| GO:0030951 | Establishment or maintenance of microtubule cytoskeleton polarity | IMP | biological_process |
| GO:0035371 | Microtubule plus-end | IDA | cellular_component |
| GO:0043234 | Protein complex | IDA | cellular_component |
| GO:0050658 | RNA transport | ISS | biological_process |
| GO:0051297 | Centrosome organization | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4169012462 | 0.0236522093 | 0.9999902473 | 0.2967683508 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1646045749 |
| GSE13712_SHEAR | Down | -0.1559756805 |
| GSE13712_STATIC | Down | -0.2198526980 |
| GSE19018 | Up | 0.3687134914 |
| GSE19899_A1 | Down | -0.8451870089 |
| GSE19899_A2 | Down | -0.9518272641 |
| PubMed_21979375_A1 | Down | -0.8315203660 |
| PubMed_21979375_A2 | Down | -0.8777183008 |
| GSE35957 | Down | -0.6783739347 |
| GSE36640 | Down | -1.1479712815 |
| GSE54402 | Down | -0.3078741942 |
| GSE9593 | Down | -0.2324543938 |
| GSE43922 | Down | -0.1778929716 |
| GSE24585 | Up | 0.1682453693 |
| GSE37065 | Up | 0.0654313767 |
| GSE28863_A1 | Up | 0.9074840625 |
| GSE28863_A2 | Up | 1.1517030928 |
| GSE28863_A3 | Down | -0.1035055561 |
| GSE28863_A4 | Up | 0.3652114130 |
| GSE48662 | Down | -0.2177917476 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT006116 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020260 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025470 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027176 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030873 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-18a-5p | MIMAT0000072 | MIRT031322 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031832 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-484 | MIMAT0002174 | MIRT042131 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT044934 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046473 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
