HCSGD entry for ZNF646
1. General information
| Official gene symbol | ZNF646 |
|---|---|
| Entrez ID | 9726 |
| Gene full name | zinc finger protein 646 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4359112686 | 0.8127988336 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0514896846 |
| GSE13712_SHEAR | Down | -0.0370740988 |
| GSE13712_STATIC | Down | -0.1894643828 |
| GSE19018 | Down | -0.2483092315 |
| GSE19899_A1 | Down | -0.2373716054 |
| GSE19899_A2 | Up | 0.4551653460 |
| PubMed_21979375_A1 | Up | 0.0579750177 |
| PubMed_21979375_A2 | Up | 0.0468289444 |
| GSE35957 | Down | -0.2206862918 |
| GSE36640 | Down | -0.0097353596 |
| GSE54402 | Up | 0.0861523180 |
| GSE9593 | Up | 0.1275861331 |
| GSE43922 | Up | 0.1805161591 |
| GSE24585 | Up | 0.0627178022 |
| GSE37065 | Down | -0.0236815365 |
| GSE28863_A1 | Up | 0.2105895211 |
| GSE28863_A2 | Up | 0.3455428532 |
| GSE28863_A3 | Up | 0.2392874427 |
| GSE28863_A4 | Up | 0.0462849463 |
| GSE48662 | Up | 0.0692456062 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-378a-5p | MIMAT0000731 | MIRT044002 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044630 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30b-5p | MIMAT0000420 | MIRT046158 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
