HCSGD entry for N4BP1
1. General information
| Official gene symbol | N4BP1 |
|---|---|
| Entrez ID | 9683 |
| Gene full name | NEDD4 binding protein 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005730 | Nucleolus | IEA ISS | cellular_component |
| GO:0016605 | PML body | IEA ISS | cellular_component |
| GO:0031397 | Negative regulation of protein ubiquitination | IEA ISS | biological_process |
| GO:0032435 | Negative regulation of proteasomal ubiquitin-dependent protein catabolic process | IEA ISS | biological_process |
| GO:0034644 | Cellular response to UV | IEA IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0352353710 | 0.9818469435 | 0.4283036866 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0063605725 |
| GSE13712_SHEAR | Up | 0.7042347487 |
| GSE13712_STATIC | Up | 0.6603762924 |
| GSE19018 | Up | 0.0935916156 |
| GSE19899_A1 | Down | -0.0235832466 |
| GSE19899_A2 | Up | 0.1609702935 |
| PubMed_21979375_A1 | Up | 0.6530228277 |
| PubMed_21979375_A2 | Up | 0.3959344743 |
| GSE35957 | Down | -0.1847385699 |
| GSE36640 | Up | 0.2824437277 |
| GSE54402 | Up | 0.1031873032 |
| GSE9593 | Down | -0.0602356009 |
| GSE43922 | Up | 0.0161171843 |
| GSE24585 | Up | 0.1108020867 |
| GSE37065 | Up | 0.3595096180 |
| GSE28863_A1 | Up | 0.4676180708 |
| GSE28863_A2 | Up | 0.5710955171 |
| GSE28863_A3 | Up | 0.0663789197 |
| GSE28863_A4 | Down | -0.0648319258 |
| GSE48662 | Up | 0.6377370170 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-708-3p | MIMAT0004927 | MIRT006412 | Luciferase reporter assay | Functional MTI | 20445018 |
| hsa-miR-28-5p | MIMAT0000085 | MIRT006411 | Luciferase reporter assay | Functional MTI | 20445018 |
| hsa-miR-151a-5p | MIMAT0004697 | MIRT006413 | Luciferase reporter assay | Functional MTI | 20445018 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027038 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031453 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-320b | MIMAT0005792 | MIRT036205 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048847 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
