HCSGD entry for SAFB2
1. General information
| Official gene symbol | SAFB2 |
|---|---|
| Entrez ID | 9667 |
| Gene full name | scaffold attachment factor B2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0042802 | Identical protein binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1992999734 | 0.8631701303 | 0.8618698374 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2640570010 |
| GSE13712_SHEAR | Up | 0.3575366145 |
| GSE13712_STATIC | Down | -0.1189740338 |
| GSE19018 | Down | -0.0936785986 |
| GSE19899_A1 | Up | 0.2322072974 |
| GSE19899_A2 | Up | 0.3822570993 |
| PubMed_21979375_A1 | Up | 0.0800020312 |
| PubMed_21979375_A2 | Up | 1.0592670139 |
| GSE35957 | Down | -0.4069865532 |
| GSE36640 | Down | -0.2661688177 |
| GSE54402 | Up | 0.3512766236 |
| GSE9593 | Down | -0.4740202762 |
| GSE43922 | Up | 0.0916290108 |
| GSE24585 | Down | -0.0026038571 |
| GSE37065 | Up | 0.0399666112 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.1033042512 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
