HCSGD entry for TTLL4
1. General information
| Official gene symbol | TTLL4 |
|---|---|
| Entrez ID | 9654 |
| Gene full name | tubulin tyrosine ligase-like family, member 4 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0005929 | Cilium | IEA | cellular_component |
| GO:0015631 | Tubulin binding | IEA ISS | molecular_function |
| GO:0016874 | Ligase activity | IEA | molecular_function |
| GO:0018095 | Protein polyglutamylation | IEA ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2537604080 | 0.8878816192 | 0.9435270095 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0266093394 |
| GSE13712_SHEAR | Up | 0.1730171745 |
| GSE13712_STATIC | Up | 0.1129405099 |
| GSE19018 | Up | 0.0354841271 |
| GSE19899_A1 | Up | 0.1435598556 |
| GSE19899_A2 | Up | 0.1429759279 |
| PubMed_21979375_A1 | Up | 0.3940363848 |
| PubMed_21979375_A2 | Up | 0.3979520608 |
| GSE35957 | Down | -0.1137634355 |
| GSE36640 | Down | -0.5803236894 |
| GSE54402 | Up | 0.4076416919 |
| GSE9593 | Down | -0.1409249125 |
| GSE43922 | Up | 0.5366054582 |
| GSE24585 | Down | -0.1469420908 |
| GSE37065 | Up | 0.0535607318 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.0970794777 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027603 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037173 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
