HCSGD entry for GTF2IRD1

1. General information

Official gene symbolGTF2IRD1
Entrez ID9569
Gene full nameGTF2I repeat domain containing 1
Other gene symbolsBEN CREAM1 GTF3 MUSTRD1 RBAP2 WBS WBSCR11 WBSCR12 hMusTRD1alpha1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003677DNA bindingIEAmolecular_function
GO:0003700Sequence-specific DNA binding transcription factor activityNASmolecular_function
GO:0003705RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activityNASmolecular_function
GO:0005634NucleusIDA NAScellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0006355Regulation of transcription, DNA-templatedNASbiological_process
GO:0006357Regulation of transcription from RNA polymerase II promoterNASbiological_process
GO:0006366Transcription from RNA polymerase II promoterNASbiological_process
GO:0009790Embryo developmentIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.94629684660.03118168380.99999024730.3313753331

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0477786349
GSE13712_SHEARDown-0.0393935836
GSE13712_STATICUp0.4125045559
GSE19018Up0.0636743162
GSE19899_A1Down-0.7718325462
GSE19899_A2Down-0.8036617318
PubMed_21979375_A1Up0.0115603212
PubMed_21979375_A2Up0.4520190054
GSE35957Down-0.3617900336
GSE36640Down-0.6075582248
GSE54402Down-0.2176220170
GSE9593Down-0.3662700171
GSE43922Down-0.4129828825
GSE24585Up0.0111426609
GSE37065Down-0.0794360983
GSE28863_A1Down-0.2157056061
GSE28863_A2Down-0.3298808785
GSE28863_A3Down-0.1809813444
GSE28863_A4Down-0.0743658073
GSE48662Down-0.0164741074

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.