HCSGD entry for H2AFY
1. General information
| Official gene symbol | H2AFY |
|---|---|
| Entrez ID | 9555 |
| Gene full name | H2A histone family, member Y |
| Other gene symbols | H2A.y H2A/y H2AF12M H2AFJ MACROH2A1.1 mH2A1 macroH2A1.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | IEA NAS | cellular_component |
| GO:0000793 | Condensed chromosome | IEA | cellular_component |
| GO:0001739 | Sex chromatin | TAS | cellular_component |
| GO:0001740 | Barr body | IDA | cellular_component |
| GO:0003677 | DNA binding | IEA NAS | molecular_function |
| GO:0003682 | Chromatin binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006334 | Nucleosome assembly | IEA NAS | biological_process |
| GO:0007549 | Dosage compensation | IDA | biological_process |
| GO:0016568 | Chromatin modification | IEA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8984055431 | 0.3145908248 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0954421126 |
| GSE13712_SHEAR | Down | -0.0854503637 |
| GSE13712_STATIC | Down | -0.1929255947 |
| GSE19018 | Down | -0.2230309664 |
| GSE19899_A1 | Down | -0.0058651798 |
| GSE19899_A2 | Down | -0.1467756938 |
| PubMed_21979375_A1 | Down | -0.6957415638 |
| PubMed_21979375_A2 | Up | 0.0445221895 |
| GSE35957 | Down | -0.1148094406 |
| GSE36640 | Down | -0.2081386490 |
| GSE54402 | Down | -0.1425835320 |
| GSE9593 | Up | 0.1084848929 |
| GSE43922 | Up | 0.1395776458 |
| GSE24585 | Down | -0.0319758494 |
| GSE37065 | Down | -0.0529630468 |
| GSE28863_A1 | Down | -0.0007945602 |
| GSE28863_A2 | Up | 0.2149582445 |
| GSE28863_A3 | Down | -0.1902228060 |
| GSE28863_A4 | Down | -0.0967183641 |
| GSE48662 | Up | 0.1523281678 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020724 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040181 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041638 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-148b-3p | MIMAT0000759 | MIRT043582 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT047331 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048478 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
