HCSGD entry for ZNF254
1. General information
| Official gene symbol | ZNF254 |
|---|---|
| Entrez ID | 9534 |
| Gene full name | zinc finger protein 254 |
| Other gene symbols | BMZF-5 HD-ZNF1 ZNF539 ZNF91L |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5877607310 | 0.3594081380 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2161568323 |
| GSE13712_SHEAR | Down | -0.0228796012 |
| GSE13712_STATIC | Up | 0.2119423226 |
| GSE19018 | Down | -0.2662300458 |
| GSE19899_A1 | Down | -0.0604201561 |
| GSE19899_A2 | Down | -0.3313391041 |
| PubMed_21979375_A1 | Up | 0.2008951976 |
| PubMed_21979375_A2 | Down | -0.2615308476 |
| GSE35957 | Down | -0.0478887745 |
| GSE36640 | Down | -0.5040864336 |
| GSE54402 | Up | 0.0951506352 |
| GSE9593 | Down | -0.2489478650 |
| GSE43922 | Down | -0.2444991669 |
| GSE24585 | Up | 0.2130753621 |
| GSE37065 | Up | 0.2222133544 |
| GSE28863_A1 | Up | 0.3931444105 |
| GSE28863_A2 | Up | 0.1831924711 |
| GSE28863_A3 | Down | -0.4147461965 |
| GSE28863_A4 | Up | 0.0347726391 |
| GSE48662 | Up | 0.2287103757 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020788 | Reporter assay;Other | Functional MTI | 20584899 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
