HCSGD entry for TBPL1
1. General information
| Official gene symbol | TBPL1 |
|---|---|
| Entrez ID | 9519 |
| Gene full name | TBP-like 1 |
| Other gene symbols | MGC:8389 MGC:9620 STUD TLF TLP TRF2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001675 | Acrosome assembly | IEA | biological_process |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003713 | Transcription coactivator activity | TAS | molecular_function |
| GO:0005672 | Transcription factor TFIIA complex | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006235 | DTTP biosynthetic process | IEA | biological_process |
| GO:0006352 | DNA-templated transcription, initiation | IEA | biological_process |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0007289 | Spermatid nucleus differentiation | IEA | biological_process |
| GO:2001141 | Regulation of RNA biosynthetic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1585407925 | 0.7466095437 | 0.7897946064 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2104844657 |
| GSE13712_SHEAR | Up | 0.0919242831 |
| GSE13712_STATIC | Up | 0.0991618560 |
| GSE19018 | Up | 0.0642195182 |
| GSE19899_A1 | Up | 0.3798672891 |
| GSE19899_A2 | Up | 0.0437123583 |
| PubMed_21979375_A1 | Up | 0.7531944471 |
| PubMed_21979375_A2 | Up | 0.3977639291 |
| GSE35957 | Down | -0.3902971106 |
| GSE36640 | Down | -0.1208686215 |
| GSE54402 | Up | 0.5004001367 |
| GSE9593 | Up | 0.0334467267 |
| GSE43922 | Up | 0.2418648244 |
| GSE24585 | Down | -0.3485926341 |
| GSE37065 | Down | -0.1815387036 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.2023730955 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021391 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030363 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-424-5p | MIMAT0001341 | MIRT042456 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
