HCSGD entry for RPH3AL
1. General information
| Official gene symbol | RPH3AL |
|---|---|
| Entrez ID | 9501 |
| Gene full name | rabphilin 3A-like (without C2 domains) |
| Other gene symbols | NOC2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | TAS | cellular_component |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0006887 | Exocytosis | IEA | biological_process |
| GO:0008092 | Cytoskeletal protein binding | TAS | molecular_function |
| GO:0017137 | Rab GTPase binding | IEA | molecular_function |
| GO:0017158 | Regulation of calcium ion-dependent exocytosis | IEA | biological_process |
| GO:0030274 | LIM domain binding | IEA | molecular_function |
| GO:0030658 | Transport vesicle membrane | IEA | cellular_component |
| GO:0030667 | Secretory granule membrane | IEA | cellular_component |
| GO:0042493 | Response to drug | IEA | biological_process |
| GO:0042593 | Glucose homeostasis | IEA | biological_process |
| GO:0045744 | Negative regulation of G-protein coupled receptor protein signaling pathway | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0050714 | Positive regulation of protein secretion | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4285201436 | 0.9013875195 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0372334777 |
| GSE13712_SHEAR | Down | -0.1453022936 |
| GSE13712_STATIC | Up | 0.0447370511 |
| GSE19018 | Up | 0.2398639591 |
| GSE19899_A1 | Up | 0.0757950664 |
| GSE19899_A2 | Up | 0.1188558097 |
| PubMed_21979375_A1 | Up | 0.0150656049 |
| PubMed_21979375_A2 | Up | 0.0249231912 |
| GSE35957 | Down | -0.0138686994 |
| GSE36640 | Up | 0.1733353019 |
| GSE54402 | Down | -0.0562223994 |
| GSE9593 | Down | -0.0771155632 |
| GSE43922 | Up | 0.1002296875 |
| GSE24585 | Down | -0.0057380793 |
| GSE37065 | Down | -0.0997816896 |
| GSE28863_A1 | Down | -0.0532093730 |
| GSE28863_A2 | Down | -0.0595357241 |
| GSE28863_A3 | Up | 0.2209034312 |
| GSE28863_A4 | Up | 0.1276988504 |
| GSE48662 | Up | 0.3487087620 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018406 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051146 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
