HCSGD entry for H2AFV
1. General information
| Official gene symbol | H2AFV |
|---|---|
| Entrez ID | 94239 |
| Gene full name | H2A histone family, member V |
| Other gene symbols | H2A.Z-2 H2AV |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | IEA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006334 | Nucleosome assembly | IEA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9826446298 | 0.0020947798 | 0.9999902473 | 0.0876853736 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.5355255069 |
| GSE13712_SHEAR | Down | -0.7726088439 |
| GSE13712_STATIC | Down | -0.8018666341 |
| GSE19018 | Up | 0.0988255365 |
| GSE19899_A1 | Down | -0.9004319899 |
| GSE19899_A2 | Down | -1.1099236561 |
| PubMed_21979375_A1 | Down | -1.2962944155 |
| PubMed_21979375_A2 | Down | -1.4483012058 |
| GSE35957 | Down | -0.4829215759 |
| GSE36640 | Down | -1.9713806049 |
| GSE54402 | Down | -0.4035881017 |
| GSE9593 | Down | -0.4375745779 |
| GSE43922 | Down | -0.6329200233 |
| GSE24585 | Up | 0.1919402625 |
| GSE37065 | Down | -0.1890467994 |
| GSE28863_A1 | Up | 0.4006754536 |
| GSE28863_A2 | Up | 0.5979984531 |
| GSE28863_A3 | Down | -0.0429826345 |
| GSE28863_A4 | Up | 0.0126593050 |
| GSE48662 | Down | -0.5390391519 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-615-3p | MIMAT0003283 | MIRT040171 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040878 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041848 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048453 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-3p | MIMAT0000071 | MIRT050761 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
