HCSGD entry for PEX16

1. General information

Official gene symbolPEX16
Entrez ID9409
Gene full nameperoxisomal biogenesis factor 16
Other gene symbolsPBD8A PBD8B
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005777PeroxisomeIDAcellular_component
GO:0005778Peroxisomal membraneIDA IEAcellular_component
GO:0005779Integral component of peroxisomal membraneIDA IMPcellular_component
GO:0005783Endoplasmic reticulumIDAcellular_component
GO:0005789Endoplasmic reticulum membraneIDAcellular_component
GO:0006625Protein targeting to peroxisomeIMPbiological_process
GO:0007031Peroxisome organizationIMPbiological_process
GO:0008022Protein C-terminus bindingIPImolecular_function
GO:0016557Peroxisome membrane biogenesisIMPbiological_process
GO:0016558Protein import into peroxisome matrixIMPbiological_process
GO:0022615Protein to membrane dockingIDAbiological_process
GO:0032581ER-dependent peroxisome organizationIDAbiological_process
GO:0045046Protein import into peroxisome membraneIMPbiological_process
GO:0070972Protein localization to endoplasmic reticulumIDAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.30617728050.93585685570.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1795422946
GSE13712_SHEARDown-0.0802248143
GSE13712_STATICUp0.1766187199
GSE19018Down-0.0888376281
GSE19899_A1Down-0.0837779320
GSE19899_A2Up0.5869381543
PubMed_21979375_A1Up0.7081710308
PubMed_21979375_A2Up0.0699274494
GSE35957Down-0.0062832879
GSE36640Up0.1067106522
GSE54402Up0.2530967169
GSE9593Down-0.0940796071
GSE43922Up0.0487242115
GSE24585Up0.0663504038
GSE37065Up0.0318952644
GSE28863_A1Down-0.1729641569
GSE28863_A2Down-0.0697574564
GSE28863_A3Up0.1137673521
GSE28863_A4Up0.0780624715
GSE48662Up0.0771523054

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-124-3pMIMAT0000422MIRT022948MicroarrayFunctional MTI (Weak)18668037
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.