HCSGD entry for COG1
1. General information
| Official gene symbol | COG1 |
|---|---|
| Entrez ID | 9382 |
| Gene full name | component of oligomeric golgi complex 1 |
| Other gene symbols | CDG2G LDLB |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0006891 | Intra-Golgi vesicle-mediated transport | NAS | biological_process |
| GO:0007030 | Golgi organization | NAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0017119 | Golgi transport complex | IDA NAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0754985563 | 0.9583901561 | 0.5819026354 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3171095899 |
| GSE13712_SHEAR | Up | 0.3127464679 |
| GSE13712_STATIC | Up | 0.2687971849 |
| GSE19018 | Up | 0.0924926066 |
| GSE19899_A1 | Down | -0.0827028335 |
| GSE19899_A2 | Up | 0.2505553570 |
| PubMed_21979375_A1 | Up | 0.6750722899 |
| PubMed_21979375_A2 | Up | 0.5834364260 |
| GSE35957 | Up | 0.0024831687 |
| GSE36640 | Up | 0.3812513481 |
| GSE54402 | Down | -0.0426846058 |
| GSE9593 | Up | 0.0804414710 |
| GSE43922 | Up | 0.1283766793 |
| GSE24585 | Up | 0.6796070210 |
| GSE37065 | Up | 0.0724515228 |
| GSE28863_A1 | Down | -0.1712166330 |
| GSE28863_A2 | Down | -0.3747438510 |
| GSE28863_A3 | Up | 0.0871460383 |
| GSE28863_A4 | Up | 0.0405864679 |
| GSE48662 | Up | 0.0533644424 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-484 | MIMAT0002174 | MIRT042242 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045480 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
