HCSGD entry for COX5A
1. General information
| Official gene symbol | COX5A |
|---|---|
| Entrez ID | 9377 |
| Gene full name | cytochrome c oxidase subunit Va |
| Other gene symbols | COX COX-VA VA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004129 | Cytochrome-c oxidase activity | IEA | molecular_function |
| GO:0005743 | Mitochondrial inner membrane | IEA TAS | cellular_component |
| GO:0006810 | Transport | TAS | biological_process |
| GO:0006812 | Cation transport | TAS | biological_process |
| GO:0009055 | Electron carrier activity | TAS | molecular_function |
| GO:0015672 | Monovalent inorganic cation transport | TAS | biological_process |
| GO:0022904 | Respiratory electron transport chain | TAS | biological_process |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0044237 | Cellular metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
| GO:1902600 | Hydrogen ion transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1263225675 | 0.7883543102 | 0.7245362309 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1322786618 |
| GSE13712_SHEAR | Down | -0.1849534040 |
| GSE13712_STATIC | Up | 0.1816638894 |
| GSE19018 | Down | -0.0194355481 |
| GSE19899_A1 | Up | 0.2638409242 |
| GSE19899_A2 | Up | 0.6983119514 |
| PubMed_21979375_A1 | Up | 0.9103526964 |
| PubMed_21979375_A2 | Up | 0.6415870761 |
| GSE35957 | Down | -0.1987240966 |
| GSE36640 | Down | -0.2888798699 |
| GSE54402 | Up | 0.3496510928 |
| GSE9593 | Down | -0.1250447345 |
| GSE43922 | Up | 0.2204656800 |
| GSE24585 | Down | -0.0769830202 |
| GSE37065 | Down | -0.0073744350 |
| GSE28863_A1 | Down | -0.1185196251 |
| GSE28863_A2 | Down | -0.4461381184 |
| GSE28863_A3 | Up | 0.0743629217 |
| GSE28863_A4 | Up | 0.1786376840 |
| GSE48662 | Down | -0.0576794631 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-484 | MIMAT0002174 | MIRT042244 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043091 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048508 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050490 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
