HCSGD entry for TXNL1
1. General information
| Official gene symbol | TXNL1 |
|---|---|
| Entrez ID | 9352 |
| Gene full name | thioredoxin-like 1 |
| Other gene symbols | TRP32 TXL-1 TXNL Txl |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000502 | Proteasome complex | IEA | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006662 | Glycerol ether metabolic process | IEA | biological_process |
| GO:0015035 | Protein disulfide oxidoreductase activity | IEA | molecular_function |
| GO:0015036 | Disulfide oxidoreductase activity | IDA | molecular_function |
| GO:0045454 | Cell redox homeostasis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5295719312 | 0.2398619391 | 0.9999902473 | 0.9430673936 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1602782669 |
| GSE13712_SHEAR | Up | 0.0546795451 |
| GSE13712_STATIC | Down | -0.0178041670 |
| GSE19018 | Down | -1.0127118942 |
| GSE19899_A1 | Up | 0.0251786217 |
| GSE19899_A2 | Down | -0.4159614835 |
| PubMed_21979375_A1 | Down | -0.8389914871 |
| PubMed_21979375_A2 | Up | 0.2708604712 |
| GSE35957 | Up | 0.1017174111 |
| GSE36640 | Up | 1.3507420848 |
| GSE54402 | Down | -0.0997600557 |
| GSE9593 | Up | 0.1710357440 |
| GSE43922 | Up | 0.0215464123 |
| GSE24585 | Down | -0.4835782963 |
| GSE37065 | Down | -0.0399622712 |
| GSE28863_A1 | Up | 0.1353623261 |
| GSE28863_A2 | Up | 0.1169770190 |
| GSE28863_A3 | Down | -0.0745633568 |
| GSE28863_A4 | Up | 0.0715733776 |
| GSE48662 | Down | -0.0373635799 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26a-5p | MIMAT0000082 | MIRT050179 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051069 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
