HCSGD entry for TRIP4
1. General information
| Official gene symbol | TRIP4 |
|---|---|
| Entrez ID | 9325 |
| Gene full name | thyroid hormone receptor interactor 4 |
| Other gene symbols | ASC-1 ASC1 HsT17391 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003713 | Transcription coactivator activity | TAS | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005815 | Microtubule organizing center | IEA | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016922 | Ligand-dependent nuclear receptor binding | IDA | molecular_function |
| GO:0045893 | Positive regulation of transcription, DNA-templated | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3332271722 | 0.5654298469 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0589096331 |
| GSE13712_SHEAR | Up | 0.1382694521 |
| GSE13712_STATIC | Up | 0.3861401803 |
| GSE19018 | Down | -0.3068766396 |
| GSE19899_A1 | Up | 0.1610755775 |
| GSE19899_A2 | Up | 0.2949237543 |
| PubMed_21979375_A1 | Up | 0.7220472729 |
| PubMed_21979375_A2 | Up | 0.1979528690 |
| GSE35957 | Down | -0.2869230235 |
| GSE36640 | Up | 0.0647058584 |
| GSE54402 | Down | -0.0760982750 |
| GSE9593 | Down | -0.0417704010 |
| GSE43922 | Up | 0.0697355308 |
| GSE24585 | Up | 0.4351226510 |
| GSE37065 | Down | -0.1929264578 |
| GSE28863_A1 | Down | -0.1360523027 |
| GSE28863_A2 | Down | -0.0532799946 |
| GSE28863_A3 | Down | -0.4313651311 |
| GSE28863_A4 | Up | 0.1165843839 |
| GSE48662 | Down | -0.4476683328 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
