HCSGD entry for NREP
1. General information
| Official gene symbol | NREP |
|---|---|
| Entrez ID | 9315 |
| Gene full name | neuronal regeneration related protein |
| Other gene symbols | C5orf13 D4S114 P311 PRO1873 PTZ17 SEZ17 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0017015 | Regulation of transforming growth factor beta receptor signaling pathway | IEA | biological_process |
| GO:0031103 | Axon regeneration | IEA | biological_process |
| GO:0045664 | Regulation of neuron differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9788013145 | 0.0000409141 | 0.9999902473 | 0.0109660000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.2379091134 |
| GSE13712_SHEAR | Down | -0.5082833158 |
| GSE13712_STATIC | Down | -0.3867482042 |
| GSE19018 | Up | 0.1778100443 |
| GSE19899_A1 | Down | -1.4372851553 |
| GSE19899_A2 | Down | -3.5766123216 |
| PubMed_21979375_A1 | Down | -5.5186441300 |
| PubMed_21979375_A2 | Down | -3.9923163019 |
| GSE35957 | Up | 0.4460653110 |
| GSE36640 | Down | -1.9057232712 |
| GSE54402 | Down | -1.4308535215 |
| GSE9593 | Down | -0.5921139997 |
| GSE43922 | Down | -2.8110915257 |
| GSE24585 | Down | -0.0182577260 |
| GSE37065 | Down | -0.3713679437 |
| GSE28863_A1 | Down | -0.2439829561 |
| GSE28863_A2 | Up | 0.1125369703 |
| GSE28863_A3 | Up | 0.5675657436 |
| GSE28863_A4 | Down | -0.5815765851 |
| GSE48662 | Down | -0.6487107273 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024413 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026664 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027728 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-29b-3p | MIMAT0000100 | MIRT048382 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
