HCSGD entry for SLC38A5
1. General information
| Official gene symbol | SLC38A5 |
|---|---|
| Entrez ID | 92745 |
| Gene full name | solute carrier family 38, member 5 |
| Other gene symbols | JM24 SN2 SNAT5 pp7194 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006811 | Ion transport | TAS | biological_process |
| GO:0006865 | Amino acid transport | TAS | biological_process |
| GO:0015187 | Glycine transmembrane transporter activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0171288857 | 0.2650173626 | 0.3224007138 | 0.9867933362 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0238870693 |
| GSE13712_SHEAR | Up | 1.5339147118 |
| GSE13712_STATIC | Up | 2.5090258438 |
| GSE19018 | Down | -0.0756525592 |
| GSE19899_A1 | Up | 0.1209960992 |
| GSE19899_A2 | Up | 0.4595640504 |
| PubMed_21979375_A1 | Up | 0.2841860014 |
| PubMed_21979375_A2 | Up | 0.6348405285 |
| GSE35957 | Down | -1.4211821314 |
| GSE36640 | Down | -0.1918707181 |
| GSE54402 | Up | 0.1466309153 |
| GSE9593 | Down | -0.8859797793 |
| GSE43922 | Up | 1.0981463037 |
| GSE24585 | Down | -0.0289673389 |
| GSE37065 | Up | 0.4595123913 |
| GSE28863_A1 | Down | -0.4524154273 |
| GSE28863_A2 | Up | 0.3169115458 |
| GSE28863_A3 | Down | -0.5269538278 |
| GSE28863_A4 | Down | -0.0540504853 |
| GSE48662 | Up | 0.2721349491 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT001413 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020892 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022809 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028564 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032417 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
