HCSGD entry for RAB11B
1. General information
| Official gene symbol | RAB11B |
|---|---|
| Entrez ID | 9230 |
| Gene full name | RAB11B, member RAS oncogene family |
| Other gene symbols | H-YPT3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001881 | Receptor recycling | IEA ISS | biological_process |
| GO:0003924 | GTPase activity | IDA IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005525 | GTP binding | IDA IEA | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0006184 | GTP catabolic process | IDA | biological_process |
| GO:0007264 | Small GTPase mediated signal transduction | IEA | biological_process |
| GO:0008021 | Synaptic vesicle | IEA ISS | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0019003 | GDP binding | IDA | molecular_function |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030670 | Phagocytic vesicle membrane | IEA | cellular_component |
| GO:0030672 | Synaptic vesicle membrane | IEA | cellular_component |
| GO:0032402 | Melanosome transport | IEA ISS | biological_process |
| GO:0033572 | Transferrin transport | IEA ISS | biological_process |
| GO:0035773 | Insulin secretion involved in cellular response to glucose stimulus | IEA ISS | biological_process |
| GO:0044070 | Regulation of anion transport | IMP | biological_process |
| GO:0045054 | Constitutive secretory pathway | IEA IMP | biological_process |
| GO:0045055 | Regulated secretory pathway | IEA ISS | biological_process |
| GO:0045335 | Phagocytic vesicle | IDA | cellular_component |
| GO:0055037 | Recycling endosome | ISS | cellular_component |
| GO:0055038 | Recycling endosome membrane | IEA | cellular_component |
| GO:0071468 | Cellular response to acidity | IDA | biological_process |
| GO:1990126 | Retrograde transport, endosome to plasma membrane | IMP | biological_process |
| GO:2000008 | Regulation of protein localization to cell surface | IMP | biological_process |
| GO:2001135 | Regulation of endocytic recycling | IEA ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4255949698 | 0.3820401694 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0796993565 |
| GSE13712_SHEAR | Down | -0.0906873426 |
| GSE13712_STATIC | Down | -0.4707460694 |
| GSE19018 | Down | -0.0992065287 |
| GSE19899_A1 | Down | -0.0408056044 |
| GSE19899_A2 | Up | 0.4203338578 |
| PubMed_21979375_A1 | Down | -0.1581396384 |
| PubMed_21979375_A2 | Down | -0.4189339411 |
| GSE35957 | Up | 0.2681366420 |
| GSE36640 | Up | 0.1086399614 |
| GSE54402 | Up | 0.0576679193 |
| GSE9593 | Down | -0.0280724237 |
| GSE43922 | Down | -0.0847982593 |
| GSE24585 | Up | 0.1329935739 |
| GSE37065 | Down | -0.0450691148 |
| GSE28863_A1 | Up | 0.1972743014 |
| GSE28863_A2 | Down | -0.0095748571 |
| GSE28863_A3 | Up | 0.1950733304 |
| GSE28863_A4 | Down | -0.0634648240 |
| GSE48662 | Up | 0.3551404578 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
